The detailed information of tRNA gene sequence


Sequence ID>WENV180097597
Genome IDMTBK01198995
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 418
End posion on genome 343
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tagtgttcgc
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGCTGCGGGTTCGATT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
ctataccatt
Secondary structure (Cloverleaf model)
>WENV180097597	Trp	CCA
                   c      GCCA ctataccatt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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