The detailed information of tRNA gene sequence


Sequence ID>WENV180097600
Genome IDMTBK01199276
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 12
End posion on genome 97
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgggtctga
tRNA gene sequence 
GTCGAGGTCGCCTAGCTTGGTATGGCGCAGGTTTGCTAAACCTGTTCCGCTCCGCGGATC
GTGGGTTCGAATCCCACCCTCGGCGCta
Downstream region at tRNA end position 
tgttacctgt
Secondary structure (Cloverleaf model)
>WENV180097600	Ser	GCT
                   a      GCta tgttacctgt
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        C      | | | | |     G
    T       T C C G       G T G G G     C
    T         | | |                 T T
    G       T G G C
      G T A        G     TTCCGCTCCGCGGATC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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