The detailed information of tRNA gene sequence


Sequence ID>WENV180097607
Genome IDMTBK01199734
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1366
End posion on genome 1291
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gccatttttt
tRNA gene sequence 
GCCGAGATAGCTCAGTCGGTAGAGCAGCGGACTGAAAATCCGCGTGTCCCCAGTTCGATT
CTGGGTCTCGGCACCA
Downstream region at tRNA end position 
gagatgcgga
Secondary structure (Cloverleaf model)
>WENV180097607	Phe	GAA
                   t      ACCA gagatgcgga
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T T
                    T     G G G T C     A
      T G A        A      | | | | |     G
    C       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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