The detailed information of tRNA gene sequence


Sequence ID>WENV180097609
Genome IDMTBK01199734
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1204
End posion on genome 1131
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tccattttga
tRNA gene sequence 
GGCGACATAGCCAAGTGGTAAGGCAGAGGACTGCAAATCCTTTACCCCCGGTTCGAATCC
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
ctttattttt
Secondary structure (Cloverleaf model)
>WENV180097609	Cys	GCA
                   a      TCCA ctttattttt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     G
      T     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TACC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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