The detailed information of tRNA gene sequence


Sequence ID>WENV180097624
Genome IDMTBK01200335
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3110
End posion on genome 3035
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tatcgcatac
tRNA gene sequence 
AGGCCAGTAGCTCAATTTGGCAGAGCACCGCTCTCCAAAAGCGGGGGTTGCGGGTTCAAG
TCCTGCCTGGCCTGCCt
Downstream region at tRNA end position 
ggttattttc
Secondary structure (Cloverleaf model)
>WENV180097624	Trp	CCA
                   c      GCCt ggttattttc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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