The detailed information of tRNA gene sequence


Sequence ID>WENV180097625
Genome IDMTBK01200373
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4366
End posion on genome 4440
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gcccgcattt
tRNA gene sequence 
GGGGTATTAGCTCAGTTGGCCAGAGCGCTTGACTGGCAGTCAAGAGGTCATCGGTTCGAT
TCCGATATGCTCCACgc
Downstream region at tRNA end position 
tggcaatcaa
Secondary structure (Cloverleaf model)
>WENV180097625	Ala	GGC
                   t      ACgc tggcaatcaa
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     A - T
                     T - A          T T
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C C A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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