The detailed information of tRNA gene sequence


Sequence ID>WENV180097639
Genome IDMTBK01200946
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 338
End posion on genome 267
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtggacccct
tRNA gene sequence 
GGCGACGTGGCCGAGTGGTTAGGCAGAGGCCTGCAAAGCCTTGTACACCGGTTCGAATCC
GGTCGTCGCCTCga
Downstream region at tRNA end position 
agggcggtcg
Secondary structure (Cloverleaf model)
>WENV180097639	Cys	GCA
                   t      TCga agggcggtcg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G G C C     A
        G A        G      | | | | |     G
      T     G C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        T T        A     GTAC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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