The detailed information of tRNA gene sequence


Sequence ID>WENV180097642
Genome IDMTBK01200959
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 6201
End posion on genome 6127
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
agataaaaaa
tRNA gene sequence 
GCGCCTATAGCTCAGTTGGTTAGAGCAACTGACTCATAATCAGTAGGTCCCTGGTTCAAG
TCCAGGTGGGCGCACag
Downstream region at tRNA end position 
aaaaaccact
Secondary structure (Cloverleaf model)
>WENV180097642	Ile2	CAT
                   a      ACag aaaaaccact
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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