The detailed information of tRNA gene sequence


Sequence ID>WENV180097648
Genome IDMTBK01201259
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 884
End posion on genome 811
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ttaaaggcaa
tRNA gene sequence 
GCCCCTGTAGCTTAATTGGATAAAGTACTAGGTTTCGGCCCTAGGAATGTGGGTTCAAAT
CCTGCCAGGGGCTCaa
Downstream region at tRNA end position 
gtgttgcatt
Secondary structure (Cloverleaf model)
>WENV180097648	Arg	TCG
                   a      TCaa gtgttgcatt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T A A        A      | + + | |     A
    T       T T C G       G T G G G     C
    G       | | | +                 T T
    G       A A G T
      A T A        A     GAAT
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       C
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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