The detailed information of tRNA gene sequence


Sequence ID>WENV180097651
Genome IDMTBK01201496
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 796
End posion on genome 720
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tctttcacgt
tRNA gene sequence 
CGGAGCGTAGCGCAGCCTGGTAGCGCGTTTGGTTCGGGACCAAAAGGTCGAGGGTTCAAC
TCCCTCCGCTCCGACCA
Downstream region at tRNA end position 
ttttttactc
Secondary structure (Cloverleaf model)
>WENV180097651	Pro	CGG
                   t      ACCA ttttttactc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T C
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       C G C G       G A G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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