The detailed information of tRNA gene sequence


Sequence ID>WENV180097652
Genome IDMTBK01201670
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1748
End posion on genome 1673
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cacaaagcaa
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGTAGAGCTTCCGGCTCATAACCGGATGGTCGGGGGTTCGACT
CCCTCTGGGCCCACCA
Downstream region at tRNA end position 
ttttttttaa
Secondary structure (Cloverleaf model)
>WENV180097652	Ile2	CAT
                   a      ACCA ttttttttaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T C
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     TGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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