The detailed information of tRNA gene sequence


Sequence ID>WENV180097654
Genome IDMTBK01201836
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 508
End posion on genome 582
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tcgatcctgt
tRNA gene sequence 
GCCTCGGTAGCTCAGCTGGTCCAGAGCGATTGACTTGTAATCAATAGGTCGCGTGTTCGA
ATCACGCTCGGGGCTttt
Downstream region at tRNA end position 
cagtaaaccg
Secondary structure (Cloverleaf model)
>WENV180097654	Thr	TGT
                   t      Tttt cagtaaaccg
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G + T          T A
                    T     C G C A C     A
    T C G A        A      | | | | |     G
  G         C T C G       G C G T G     C
  G         | | | |                 T T
  T         G A G C
    C C A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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