The detailed information of tRNA gene sequence


Sequence ID>WENV180097656
Genome IDMTBK01201950
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 362
End posion on genome 290
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaatatttat
tRNA gene sequence 
GGTCCCTTCGTCTAGGGGTTAGGACGTCAGGTTTTCATCCTGGAAACAGGGGTTCGATTC
CCCTAGGGACTACag
Downstream region at tRNA end position 
agtaaaaaga
Secondary structure (Cloverleaf model)
>WENV180097656	Glu	TTC
                   t      ACag agtaaaaaga
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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