The detailed information of tRNA gene sequence


Sequence ID>WENV180097658
Genome IDMTBK01202366
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 446
End posion on genome 521
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
agcaccatac
tRNA gene sequence 
CGCGGAGTGGAGCAGCTGGTAGCTTGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAAT
CCTGCCTCCGCAACCA
Downstream region at tRNA end position 
aatcagnnnn
Secondary structure (Cloverleaf model)
>WENV180097658	fMet	CAT
                   c      ACCA aatcagnnnn
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     G
    T       C G A G       G C A G G     C
    G       | | | +                 T T
    G       G C T T
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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