The detailed information of tRNA gene sequence


Sequence ID>WENV180097660
Genome IDMTBK01202495
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 571
End posion on genome 646
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aaacgaggtt
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGTAGAGCGAATGGTTCGCAATCATTAGGCCAGGGGTTCGAAT
CCCCTTAGCTCCACCA
Downstream region at tRNA end position 
taattttttc
Secondary structure (Cloverleaf model)
>WENV180097660	Ala	CGC
                   t      ACCA taattttttc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    A - T
                    A - T
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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