The detailed information of tRNA gene sequence


Sequence ID>WENV180097665
Genome IDMTBK01203152
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1077
End posion on genome 1001
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgggctcct
tRNA gene sequence 
GGCGCTTTAGCTCAGTTGGTTAGAGCGACGGAATCATAATCCGCAGGTCCGGGGTTCAAG
TCCCTGAAGCGCCACCA
Downstream region at tRNA end position 
cccgatgccg
Secondary structure (Cloverleaf model)
>WENV180097665	Met	CAT
                   t      ACCA cccgatgccg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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