The detailed information of tRNA gene sequence


Sequence ID>WENV180097670
Genome IDMTBK01203329
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2041
End posion on genome 2133
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
accatttttt
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCACCGGCCTTCCAAGCCGGCTATGNNNNNNNNNNCCG
GCTATGTGAGTTCGATTCTCATCACCCGCTCCA
Downstream region at tRNA end position 
ttatcctttt
Secondary structure (Cloverleaf model)
>WENV180097670	Gly	TCC
                   t      TCCA ttatcctttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T A C T C     A
        A A        A      + | | | |     G
      T     C T C G       G T G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     CTATGNNNNNNNNNNCCGGCTAT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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