The detailed information of tRNA gene sequence


Sequence ID>WENV180097672
Genome IDMTBK01203329
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2234
End posion on genome 2310
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aaatattacg
tRNA gene sequence 
GTGGGTATAGCTCAGTTGGTTAGAGCGCCAGGTTGTGGCCCTGGAGGTCGCCGGTTCGAA
TCCGGTTACTCACCCCA
Downstream region at tRNA end position 
ttaaaaatgt
Secondary structure (Cloverleaf model)
>WENV180097672	His	GTG
                   g      CCCA ttaaaaatgt
                     G - C
                     T - A
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T          T A
                    T     T G G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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