The detailed information of tRNA gene sequence


Sequence ID>WENV180097677
Genome IDMTBK01203525
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 9500
End posion on genome 9426
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcaccacagc
tRNA gene sequence 
GACCCCTTCGTCTATCGGTCAGGACACAAGATTTTCATTCTTGTAAGAGGGGTTCGATTC
CCCTAGGGGTCGCCA
Downstream region at tRNA end position 
tttttatgtg
Secondary structure (Cloverleaf model)
>WENV180097677	Glu	TTC
                   c      GCCA tttttatgtg
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          A     TAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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