The detailed information of tRNA gene sequence


Sequence ID>WENV180097692
Genome IDMTBK01204899
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 341
End posion on genome 416
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcgatctttt
tRNA gene sequence 
GGCGGGATAGCTCAGTTGGCAGAGCGGAGGACTCATAAGCCTTAGGTCGCCGGTTCGACC
CCGGCTCCCGCCACCA
Downstream region at tRNA end position 
aactgttcca
Secondary structure (Cloverleaf model)
>WENV180097692	Met	CAT
                   t      ACCA aactgttcca
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          C C
                    T     C G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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