The detailed information of tRNA gene sequence


Sequence ID>WENV180097693
Genome IDMTBK01205128
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 14
End posion on genome 90
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttatatcagc
tRNA gene sequence 
GGACAATTAGCTCAGTTGGTTAGAGCGCACGATTCACATTCGTGAGGTCACTGGTTCGAG
TCCAGTATTGTCCACCA
Downstream region at tRNA end position 
agaaacattg
Secondary structure (Cloverleaf model)
>WENV180097693	Val	CAC
                   c      ACCA agaaacattg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     A - T
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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