The detailed information of tRNA gene sequence


Sequence ID>WENV180097695
Genome IDMTBK01205154
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 289
End posion on genome 216
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cggtattttT
tRNA gene sequence 
GCTCCCATCTTCTAATGGTTAGGATGTGGCCCTCTCAAGGCCTCGATACGAGTTCGAATC
TCGTTGGGAGTATtc
Downstream region at tRNA end position 
acccctgtag
Secondary structure (Cloverleaf model)
>WENV180097695	Glu	CTC
                   T      ATtc acccctgtag
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C T C     A
      T A A        C      | | | | |     G
    G       T C T T       A C G A G     C
    G       + | |                   T T
    T       G G A T
      T A          G     CGAT
                    T   T
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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