The detailed information of tRNA gene sequence


Sequence ID>WENV180097712
Genome IDMTBK01205876
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 578
End posion on genome 653
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
accggtgttc
tRNA gene sequence 
GCACCATTAGCTCAGTTGGCAGAGCAACTGACTCTTAATCAGTGGGTCCGGGGTTCGAAT
CCCCGATGGTGTACCA
Downstream region at tRNA end position 
gggacggcgg
Secondary structure (Cloverleaf model)
>WENV180097712	Lys	CTT
                   c      ACCA gggacggcgg
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     G C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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