The detailed information of tRNA gene sequence


Sequence ID>WENV180097717
Genome IDMTBK01206373
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 668
End posion on genome 593
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgacccatat
tRNA gene sequence 
GGGGGTATAGCTCAGTTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCACGAGTTCGAAT
CTCGTTATCTCCACCA
Downstream region at tRNA end position 
agagcgttcg
Secondary structure (Cloverleaf model)
>WENV180097717	Ala	TGC
                   t      ACCA agagcgttcg
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     A - T          T A
                    T     T G C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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