The detailed information of tRNA gene sequence


Sequence ID>WENV180097718
Genome IDMTBK01206479
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 218
End posion on genome 144
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctcccaaatt
tRNA gene sequence 
GGCCAGTTCGTCTAACGGTTAGGACTCAAGATTTTCATTCTTGCAATAGGGGTTCGATTC
CCCTACTGGCTACCA
Downstream region at tRNA end position 
aactataatt
Secondary structure (Cloverleaf model)
>WENV180097718	Glu	TTC
                   t      ACCA aactataatt
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A          T T
                    T     T C C C C     A
      C A A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          T     CAAT
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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