The detailed information of tRNA gene sequence


Sequence ID>WENV180097721
Genome IDMTBK01206865
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1500
End posion on genome 1588
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaaaaaaaga
tRNA gene sequence 
GGAGAGATGCCAGAGTGGTCGAATGGGGCGGTCTCGAAAACCGTTGTCCGTATATTACGG
ACCGAGGGTTCGAATCCCTCTCTCTCCGCta
Downstream region at tRNA end position 
accttttatt
Secondary structure (Cloverleaf model)
>WENV180097721	Ser	CGA
                   a      GCta accttttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTCCGTATATTACGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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