The detailed information of tRNA gene sequence


Sequence ID>WENV180097726
Genome IDMTBK01207304
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 207
End posion on genome 282
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ttgacacatt
tRNA gene sequence 
GAGTTGTTAGCTCAGCTGGTTCAGAGCATTACCTTGACAGGGTAGGGGTCACTGGTTCGA
ATCCAGTACAACTCACtt
Downstream region at tRNA end position 
actattctat
Secondary structure (Cloverleaf model)
>WENV180097726	Val	GAC
                   t      ACtt actattctat
                     G - C
                     A - T
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A          T A
                    T     T G A C C     A
    T C G A        A      | | | | |     G
  G         C T C G       A C T G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    T + G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       G
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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