The detailed information of tRNA gene sequence


Sequence ID>WENV180097727
Genome IDMTBK01207419
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 585
End posion on genome 659
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attttgaatt
tRNA gene sequence 
GGTGCGGTAGTTCAGTTGGTTAGAATATCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCACCGCga
Downstream region at tRNA end position 
caaaaaataa
Secondary structure (Cloverleaf model)
>WENV180097727	Asp	GTC
                   t      GCga caaaaaataa
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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