The detailed information of tRNA gene sequence


Sequence ID>WENV180097747
Genome IDMTBK01208896
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 611
End posion on genome 698
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctgcccgtt
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGATTGGGGCGGTCTCGAAAACCGTTGTAGCCTTGCGGCTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCta
Downstream region at tRNA end position 
ttttgttaag
Secondary structure (Cloverleaf model)
>WENV180097747	Ser	CGA
                   t      GCta ttttgttaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G       + | | |                 T T
    T       T T G G
      T G A        G     TGTAGCCTTGCGGCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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