The detailed information of tRNA gene sequence


Sequence ID>WENV180097753
Genome IDMTBK01209252
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 111110
End posion on genome 111183
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cggcggccag
tRNA gene sequence 
GCCTCCTTAGCTCAGTGGTAGAGCACTCGCCTTGTAAGCGAAAGGTCGTCAGTTCAATCC
TGACAGGGGGCTCCg
Downstream region at tRNA end position 
cgcctcaccc
Secondary structure (Cloverleaf model)
>WENV180097753	Thr	TGT
                   g      TCCg cgcctcaccc
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     T - A          C T
                    T     C A G T C     A
        G A        A      | | | | |     A
      T     C T C G       G T C A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C   A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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