The detailed information of tRNA gene sequence


Sequence ID>WENV180097755
Genome IDMTBK01209252
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 52073
End posion on genome 51997
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtggcatcaa
tRNA gene sequence 
GGCCCTGTGGCGCAGTCGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCAGGGTCGCCA
Downstream region at tRNA end position 
ttacggcgag
Secondary structure (Cloverleaf model)
>WENV180097755	Asp	GTC
                   a      GCCA ttacggcgag
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        G      + | | | |     G
    C       C G C G       G C G G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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