The detailed information of tRNA gene sequence


Sequence ID>WENV180097764
Genome IDMTBK01209749
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1607
End posion on genome 1514
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnagt
tRNA gene sequence 
GGGAGCAGATGGAAGACTGGTGTTGCCCTTGGACTTCAAATCCAATGACAGGCTTAGGGT
CTGTGGTGGGTTCGATTCCCACATGCTCCCGCCA
Downstream region at tRNA end position 
tcttaaaggc
Secondary structure (Cloverleaf model)
>WENV180097764	SeC	TCA
                   t      GCCA tcttaaaggc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     G   A          T T
                    A     C A C C C     A
      C A G        T      | | | | |     G
    T       A A G G       G T G G G     C
    G       |   | |                 T T
    G       T G C C
      T G T        C     TGACAGGCTTAGGGTCTGTG
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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