The detailed information of tRNA gene sequence


Sequence ID>WENV180097766
Genome IDMTBK01209853
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1808
End posion on genome 1883
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cccattgaaa
tRNA gene sequence 
GGGCCCGTAGCTCAACGGTCAGAGCTGGCCGCTCATAACGGCTAGGTTGGGGGTTCGAAT
CCCTCCGGGCCCACCA
Downstream region at tRNA end position 
tccgtccgcc
Secondary structure (Cloverleaf model)
>WENV180097766	Ile2	CAT
                   a      ACCA tccgtccgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C A A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      C A          T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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