The detailed information of tRNA gene sequence


Sequence ID>WENV180097774
Genome IDMTBK01210109
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 241
End posion on genome 166
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
caccttggat
tRNA gene sequence 
GGAGGCGTAGCTCAGTTGGAAGAGCAACTGACTCTTAATCAGTGGGTCGTGGGTTCGAGC
CCCTCCGCCTCTACCA
Downstream region at tRNA end position 
tcttgatccc
Secondary structure (Cloverleaf model)
>WENV180097774	Lys	CTT
                   t      ACCA tcttgatccc
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          C G
                    T     C T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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