The detailed information of tRNA gene sequence


Sequence ID>WENV180097799
Genome IDMTBK01212002
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 10406
End posion on genome 10479
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcttatctcT
tRNA gene sequence 
GGGCCTGTAGATCAGGGGTAGATCGCAGCGTTCGCAACGCTGAGGCCGCGGGTTCAAATC
CCGCCGGGTCCATtc
Downstream region at tRNA end position 
ttattttgnn
Secondary structure (Cloverleaf model)
>WENV180097799	Ala	CGC
                   T      ATtc ttattttgnn
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      G     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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