The detailed information of tRNA gene sequence


Sequence ID>WENV180097815
Genome IDMTBK01212727
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 800
End posion on genome 725
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cacaaataca
tRNA gene sequence 
GGGCCCATAGCTCAGTCGGTTAGTAGCACCTGACTCATAATCAGGGGGTCGCCGGTTCAA
GTCCGGCTGGGCCCACgg
Downstream region at tRNA end position 
acaaaaaagc
Secondary structure (Cloverleaf model)
>WENV180097815	Ile2	CAT
                   a      ACgg acaaaaaagc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     C G G C C     A
    C T G A        A      | | | | |     A
  G         C T C G       G C C G G     C
  G           | | |                 T T
  T         T A G C
    T A G          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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