The detailed information of tRNA gene sequence


Sequence ID>WENV180097818
Genome IDMTBK01212784
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1359
End posion on genome 1448
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cttctcgtgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGATTGACTCGAAATCAATTGGGCGGCTTGCCGTC
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tctataacac
Secondary structure (Cloverleaf model)
>WENV180097818	Ser	CGA
                   c      GCCA tctataacac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGGGCGGCTTGCCGTCCC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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