The detailed information of tRNA gene sequence


Sequence ID>WENV180097819
Genome IDMTBK01212784
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2237
End posion on genome 2324
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgttgagc
tRNA gene sequence 
GGAGAAGTGGCCGAGTGGTCGAAGGCGGGCGCTTGGAGAGCGTCTGGGCTGCGAGGTCCC
GTGGGTTCGAATCCCACCTTCTCCGCCA
Downstream region at tRNA end position 
tttttttatc
Secondary structure (Cloverleaf model)
>WENV180097819	Ser	GGA
                   c      GCCA tttttttatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGGGCTGCGAGGTCCC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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