The detailed information of tRNA gene sequence


Sequence ID>WENV180097823
Genome IDMTBK01212898
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 907
End posion on genome 819
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctggtccaC
tRNA gene sequence 
GGTGACGTGTCTGAGCGGCCGAAAGAGCTCGCCTCGAAAGCGAGTGTGGTGCAAGCCACC
GAGGGTTCAAATCCCTCCGTCACCGCCC
Downstream region at tRNA end position 
gtgatgtcga
Secondary structure (Cloverleaf model)
>WENV180097823	Ser	CGA
                   C      GCCC gtgatgtcga
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G T C T       G A G G G     C
    G         | | |                 T T
    C       A A G A
      C G A        G     TGTGGTGCAAGCCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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