The detailed information of tRNA gene sequence


Sequence ID>WENV180097825
Genome IDMTBK01213254
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 569
End posion on genome 663
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agaccggccc
tRNA gene sequence 
CGGAGGTGAACGGGGCCTGGTGGCCCCCCTCGTCTTCAAAACGAGTGGGACGGGCGATCC
CCGTCCGGTGGGTTCGATTCCTGCCGCCTCCGCCAc
Downstream region at tRNA end position 
cgcgaccgcc
Secondary structure (Cloverleaf model)
>WENV180097825	SeC	TCA
                   c      CCAc cgcgaccgcc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T T
                    A     C G T C C     A
      C C G        A      | + + | |     G
    T       G G G C       G T G G G     C
    G       | | |                   T T
    G       C C C C
      T G G        C     TGGGACGGGCGATCCCCGTCCG
                    C - G
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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