The detailed information of tRNA gene sequence


Sequence ID>WENV180097830
Genome IDMTBK01213387
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 11869
End posion on genome 11942
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aggcatcagc
tRNA gene sequence 
GGGCTTGTGGTCTAGCTGGTTATGACGTCTCCCTTACACGGAGAAGATCGCCCGTTCGAA
TCGGGCCAGGCCCAtcg
Downstream region at tRNA end position 
atctcgcatg
Secondary structure (Cloverleaf model)
>WENV180097830	Val	TAC
                   c      Atcg atctcgcatg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     C G G G C     A
      C G A        G      | | | | |     G
    T       T C T G       G C C C G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGATC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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