The detailed information of tRNA gene sequence


Sequence ID>WENV180097835
Genome IDMTBK01213775
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 10667
End posion on genome 10595
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atttttgcgc
tRNA gene sequence 
CGCAGGGTAGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGGAGGTTCGAGT
CCTCTCCCTGCTAgat
Downstream region at tRNA end position 
aggccgcctt
Secondary structure (Cloverleaf model)
>WENV180097835	fMet	CAT
                   c      Agat aggccgcctt
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T G A        A      + | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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