The detailed information of tRNA gene sequence


Sequence ID>WENV180097840
Genome IDMTBK01213900
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3358
End posion on genome 3431
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaatgacga
tRNA gene sequence 
ACGGGTGTAGCTCAATTGGTAGAGTGGTGGTCTCCAAAACCATAGGCTGGGAGTTCGAGT
CTCTCCACCCGTGCaa
Downstream region at tRNA end position 
acttgcataa
Secondary structure (Cloverleaf model)
>WENV180097840	Trp	CCA
                   a      GCaa acttgcataa
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGCT
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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