The detailed information of tRNA gene sequence


Sequence ID>WENV180097843
Genome IDMTBK01213999
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1059
End posion on genome 1135
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
agacaaatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGTCCCCGCAACCA
Downstream region at tRNA end position 
acagaaaccc
Secondary structure (Cloverleaf model)
>WENV180097843	fMet	CAT
                   t      ACCA acagaaaccc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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