The detailed information of tRNA gene sequence


Sequence ID>WENV180097848
Genome IDMTBK01214285
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 242
End posion on genome 331
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccccttagtg
tRNA gene sequence 
GGAGGGGTGTCGGAGCGGTTGAACGAGCCCGCCTCGAAAGCGGGTAGGCGTGTGAGCGCC
TCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
agacagttgg
Secondary structure (Cloverleaf model)
>WENV180097848	Ser	CGA
                   g      GCCA agacagttgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C T       G T G G G     C
    G         | | |                 T T
    T       A C G A
      T G A        G     TAGGCGTGTGAGCGCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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