The detailed information of tRNA gene sequence


Sequence ID>WENV180097849
Genome IDMTBK01214285
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 368
End posion on genome 457
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatatatgt
tRNA gene sequence 
GGAGGGATGTCCGAGCGGCTGAAGGAGCACGCCTGGAGAGCGTGTAGACGCGTAAGCGTC
TCGTGGGTTCAAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
taccgatgtt
Secondary structure (Cloverleaf model)
>WENV180097849	Ser	GGA
                   t      GCCA taccgatgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TAGACGCGTAAGCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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