The detailed information of tRNA gene sequence


Sequence ID>WENV180097853
Genome IDMTBK01214666
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 82
End posion on genome 174
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttatctgccc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTCGAAGGCGGGCGACTCGAAATCGTCTTGGCGGTGCTGAGCC
GTCACGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
agcctatacg
Secondary structure (Cloverleaf model)
>WENV180097853	Ser	CGA
                   c      GCCA agcctatacg
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TTGGCGGTGCTGAGCCGTCAC
                    G - C
                    G + T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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