The detailed information of tRNA gene sequence


Sequence ID>WENV180097856
Genome IDMTBK01214911
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 432
End posion on genome 523
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgcgacgtt
tRNA gene sequence 
GGAGGCGTCGCCTAGTCCGGTCTATGGCGCCGCACTGCTAATGCGGTTTGGGTCTCAAGC
CCATCGAGGGTTCAAATCCCTCCGCCTCCGCCg
Downstream region at tRNA end position 
acagatgacc
Secondary structure (Cloverleaf model)
>WENV180097856	Ser	GCT
                   t      GCCg acagatgacc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  C         T C C G       G A G G G     C
  G           | | |                 T T
  G         T G G C
    T C T A        G     TTTGGGTCTCAAGCCCATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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