The detailed information of tRNA gene sequence


Sequence ID>WENV180097873
Genome IDMTBK01215985
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 901
End posion on genome 972
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cactcacacc
tRNA gene sequence 
GGGCCCGTAGCTCAGCGGCAGAGCAGGCGGCTCATAACCGCTTGGTCGTAGGTTCGAATC
CTACCGGGCCCAtgc
Downstream region at tRNA end position 
tgatttcact
Secondary structure (Cloverleaf model)
>WENV180097873	Ile2	CAT
                   c      Atgc tgatttcact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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