The detailed information of tRNA gene sequence


Sequence ID>WENV180097874
Genome IDMTBK01216047
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1021
End posion on genome 1096
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaaagtgtt
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGCGGGTTCAAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
ttagcagatc
Secondary structure (Cloverleaf model)
>WENV180097874	Trp	CCA
                   t      GCCA ttagcagatc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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